So I've finished a draft of the mammal phylogeny paper and sent it off to the Z-man. Yay! Now he'll probably ignore it for a while and then read it and make comments about the charts and graphs or something like that. It needs more polish, for sure, but that part is not my job.
So I'm done with that and can move to the FastME paper with Olivier. I've got the protein alignments and their respective distance matrices, so it's time to build trees, trees, and more trees. This is pretty easy to automate.
On the job-seeking front, I had a meeting with a guy at State today who I know from my college buddy, let's call him Perv until he shows up with a different name. Perv is one of the big reasons I left Georgetown, namely because he's so much smarter when it comes to policy issues than I am. So I figured I had to outflank the wonks of the world by learning a little math.
I may have taken that strategy a wee bit too far. Huh huh huh.
Anyway, I got to meet a guy named Fernando at State which was good because it made it a bit more real to me that these jobs are out there. Unfortunately, not at State, at least not in the fashion of "knocking at the door". They only get their scientists through the AAAS fellowships, which I've applied for twice with no result. Well, it's just like running in a sense: the hardest thing is to start running - once you have a bit of momentum it's easier to keep moving.
Wednesday, January 16, 2008
Thursday, January 10, 2008
Ginger on the wrist
What does it say about me that I'm typing this with Ginger resting comfortably on my left wrist? I wish I could take a photo of this - I'm going to count on somebody with a digital camera doing this sometime in the near future, so blog readers can understand how much Ginger likes it when I type at the computer.
return of Ikea Boy
So I made another trek down to College Park to get some storage furniture: a bookcase, some extra shelving, a bureau, and a TV stand so I can use my coffee table as a coffee table or whatever else I want to use it as.
The extra shelving possibilities were 80 cm or 40 cm. 40 seemed too short for the Ikea bookcases I already have, so I went with the larger size. But I got home and I think what I already have are 60 cm wide, so I'm going to have to find a saw somewhere or give up on this idea.
And let's face it: finding a saw would be more fun.
The divergence paper is close to done and I should finish the draft today or tomorrow, unless I'm really slacking. The FastME paper is nowhere near done, but I'll deal with that later.
And then there's job-hunting. Well, as they say, avoidance isn't only a river in Egypt. I did find a nice possibility at AAAS in Cambridge (Mass, not the poncy place in East Anglia). But I'll treat it as a long shot.
The extra shelving possibilities were 80 cm or 40 cm. 40 seemed too short for the Ikea bookcases I already have, so I went with the larger size. But I got home and I think what I already have are 60 cm wide, so I'm going to have to find a saw somewhere or give up on this idea.
And let's face it: finding a saw would be more fun.
The divergence paper is close to done and I should finish the draft today or tomorrow, unless I'm really slacking. The FastME paper is nowhere near done, but I'll deal with that later.
And then there's job-hunting. Well, as they say, avoidance isn't only a river in Egypt. I did find a nice possibility at AAAS in Cambridge (Mass, not the poncy place in East Anglia). But I'll treat it as a long shot.
Thursday, December 20, 2007
the importance of SSRIs (or 'Whispers comes out')
I'm just saying that Tom Cruise is an idiot.
I can go months doing all the mental exercises in existence, work hard, exercise, eat right, and even swallow down St. John's Wort and still feel like crap. But a couple days back on citalopram and I'll be good as new.
SSRIs are not the end-all to avoiding depression. But having fought this battle for twenty years, both with meds and without, I think at this point, esp. as I get older, that the notion of trying to fight depression with taking meds makes about as much sense to me as a person trying to fight diabetes without insulin injections.
p.s. No, I'm not gay. I'm thin and single, but I'm not neat by any stretch of the imagination.
p.p.s. In case the p.s. seems obscure, it's a reference to a famous "Seinfeld" episode.
I can go months doing all the mental exercises in existence, work hard, exercise, eat right, and even swallow down St. John's Wort and still feel like crap. But a couple days back on citalopram and I'll be good as new.
SSRIs are not the end-all to avoiding depression. But having fought this battle for twenty years, both with meds and without, I think at this point, esp. as I get older, that the notion of trying to fight depression with taking meds makes about as much sense to me as a person trying to fight diabetes without insulin injections.
p.s. No, I'm not gay. I'm thin and single, but I'm not neat by any stretch of the imagination.
p.p.s. In case the p.s. seems obscure, it's a reference to a famous "Seinfeld" episode.
Ikea boy gets to work
So, I'm facing a mostly-empty condo, with only a bed frame, a couple bookshelves, and a futon mattress hijacked from Landru which will probably turn into a pumpkin at some point. The girls are very happy that I'm back on a queen-sized mattress, instead of the tiny twin-sized sofa-bed I was sleeping on in Montpellier. Now they can both demand my attention simultaneously, rather than be forced to take turns. (And somehow, when they are forced to take turns, it is usually Ginger's turn.)
Anyway, I'm gradually furnishing this place. First I've dug out things from storage in MD and KS. I got a cheap 19" flat-screen TV at BestBuy early this week. And a couple days ago I made a run to Ikea on Route 1.
I swear, I really am the target audience for Ikea. I just love the place. Getting furniture that I build myself is so much fun! On this trip I decided to pick up what I need most, while leaving the more luxurious items for the next trip, and the general storage items for a trip after that one. (I could probably use a few more bookshelves, but really, that's a low priority.)
So, I've picked up a desk, which is the highest priority, and a chair to go with it. And a coffee table for the TV & VCR. And a comfortable chair to sit in while watching TV. But the only thing I've assembled so far is the nightstand.* What else do I need? Dining room set, sofa, another comfortable chair or two, a mattress set, storage, etc. The mattress set is next on the list, but I think I'll defer that until after Christmas.
*In German, "nightstand" is "Nachttisch" and this is a great word for testing the tendency of English-speakers to run the end of one consonant into the next consonant. The German word for dessert is "Nachtisch", which literally means "after table", i.e. after the meal, while "Nachttisch" literally means "night table". The thing to remember is that when saying "Nachtisch" you need to have clear separation between the syllables, "Nach tisch" (nawhk tisch) and avoid the temptation to use the 't' in the first syllable. If you do that, when you think you are ordering dessert in a German restaurant, they will wonder why you are ordering a small table to be put next to your bed.
Anyway, I'm gradually furnishing this place. First I've dug out things from storage in MD and KS. I got a cheap 19" flat-screen TV at BestBuy early this week. And a couple days ago I made a run to Ikea on Route 1.
I swear, I really am the target audience for Ikea. I just love the place. Getting furniture that I build myself is so much fun! On this trip I decided to pick up what I need most, while leaving the more luxurious items for the next trip, and the general storage items for a trip after that one. (I could probably use a few more bookshelves, but really, that's a low priority.)
So, I've picked up a desk, which is the highest priority, and a chair to go with it. And a coffee table for the TV & VCR. And a comfortable chair to sit in while watching TV. But the only thing I've assembled so far is the nightstand.* What else do I need? Dining room set, sofa, another comfortable chair or two, a mattress set, storage, etc. The mattress set is next on the list, but I think I'll defer that until after Christmas.
*In German, "nightstand" is "Nachttisch" and this is a great word for testing the tendency of English-speakers to run the end of one consonant into the next consonant. The German word for dessert is "Nachtisch", which literally means "after table", i.e. after the meal, while "Nachttisch" literally means "night table". The thing to remember is that when saying "Nachtisch" you need to have clear separation between the syllables, "Nach tisch" (nawhk tisch) and avoid the temptation to use the 't' in the first syllable. If you do that, when you think you are ordering dessert in a German restaurant, they will wonder why you are ordering a small table to be put next to your bed.
Thursday, December 06, 2007
close calls for the Pats
I don't care.
OK, for starters, everybody who has doubts about the validity of the numerous penalty calls against the Ravens on fourth downs during the Patriots' last drive on Monday needs to watch the NFL network's rebroadcast of the game, and have the NFL's rules guru explain why it really is holding when Chris McAllister rides Randy Moss for the first 7 yards of his route, seeing as no contact at all is allowed beyond the 5-yard zone.
Anyway, the Pats are going to get the #1 seed and I don't really care if they go 16-0 or not.
Though it would be good to do so, if only to piss off Mercury Morris.
OK, for starters, everybody who has doubts about the validity of the numerous penalty calls against the Ravens on fourth downs during the Patriots' last drive on Monday needs to watch the NFL network's rebroadcast of the game, and have the NFL's rules guru explain why it really is holding when Chris McAllister rides Randy Moss for the first 7 yards of his route, seeing as no contact at all is allowed beyond the 5-yard zone.
Anyway, the Pats are going to get the #1 seed and I don't really care if they go 16-0 or not.
Though it would be good to do so, if only to piss off Mercury Morris.
Thursday, November 15, 2007
the streak
On Tuesday, October 16, the Cleveland Indians won Game 4 of the ALCS. Since then, none of the three major Boston franchises have lost.
- the Red Sox took the last three games of the ALCS, and then swept the World Series in four games.
- the Patriots have won three games in a row, as part of their 9-0 start to the season
- the Celtics have won their first 7 games of the NBA season
The latter is the most surprising. Apparently this is the best start since 1972-3.
Which is kinda weird, seeing as there was this guy named Bird who played on the team throughout the 80s, along with a few other pretty good guys.
I don't think this team is as good as the '86 Celtics. Of course, the entire league is flatter now - there are more teams and the average team is, IMO, worse. Individual players are better than they were in the 80s, but team play is a lost art.
The Celtics have the advantage of playing in the awful Eastern Conference. They won't play the Spurs or Suns until February. Of course the streak won't last that long, as they have a stretch in December where they play the Pistons and then go on a four-game West Coast road trip right after Christmas. The last game of the four is at the Lakers, and it's the second game in two days.
Of course, the Lakers might have gotten rid of Kobe by then, so who knows?
I'm talking about the Celtic's winning streak, which we all know isn't going to last, to avoid talking about another streak, which I don't want to jinx.
- the Red Sox took the last three games of the ALCS, and then swept the World Series in four games.
- the Patriots have won three games in a row, as part of their 9-0 start to the season
- the Celtics have won their first 7 games of the NBA season
The latter is the most surprising. Apparently this is the best start since 1972-3.
Which is kinda weird, seeing as there was this guy named Bird who played on the team throughout the 80s, along with a few other pretty good guys.
I don't think this team is as good as the '86 Celtics. Of course, the entire league is flatter now - there are more teams and the average team is, IMO, worse. Individual players are better than they were in the 80s, but team play is a lost art.
The Celtics have the advantage of playing in the awful Eastern Conference. They won't play the Spurs or Suns until February. Of course the streak won't last that long, as they have a stretch in December where they play the Pistons and then go on a four-game West Coast road trip right after Christmas. The last game of the four is at the Lakers, and it's the second game in two days.
Of course, the Lakers might have gotten rid of Kobe by then, so who knows?
I'm talking about the Celtic's winning streak, which we all know isn't going to last, to avoid talking about another streak, which I don't want to jinx.
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